质粒名称: | pcDNA3 Connexin43-GFP-APEX2 |
---|---|
出品公司: | addgene |
目录编号: | 49385 |
存储实验室: | Alice Ting |
载体骨架基本信息 |
|
载体名称: | pcDNA3 |
空载体大小: | 5366 bp |
完整质粒大小: | 8042 bp |
载体类型: | 哺乳细胞表达 |
载体抗性: | 氨苄霉素 |
生长温度: | 37 ℃ |
宿主菌: | XL1 Blue |
拷贝数: | 未知 |
插入基因信息 |
|
插入基因名称: | Connexin43 - EGFP - APEX2 |
物种来源: | soybean |
插入大小: | 2673 bp |
启动子: | CMV |
克隆方法: | 限制性内切酶 |
5’克隆位点: | AscI(未破坏) |
3’克隆位点: | XhoI(未破坏) |
5’测序引物 | T7 |
3’测序引物 | BGHrev |
文献引用方法 |
|
材料和方法部分: | pcDNA3 Connexin43-GFP-APEX2 was a gift from Alice Ting (Addgene plasmid # 49385 ; http://n2t.net/addgene:49385 ; RRID:Addgene_49385) |
参考文献部分: | Directed evolution of APEX2 for electron microscopy and proximity labeling. Lam SS, Martell JD, Kamer KJ, Deerinck TJ, Ellisman MH, Mootha VK, Ting AY. Nat Methods. 2014 Nov 24. doi: 10.1038/nmeth.3179. 10.1038/nmeth.3179 PubMed 25419960 |
买家导航
载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS pcDNA3 Connexin43-GFP-APEX2 8042 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION Expresses a tandem GFP-APEX2 fusion to the C-terminus of connexin43 in mammalian cells. ACCESSION . VERSION . KEYWORDS pcDNA3 Connexin43-GFP-APEX2 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 8042) AUTHORS Lam SS, Martell JD, Kamer KJ, Deerinck TJ, Ellisman MH, Mootha VK, Ting AY TITLE Directed evolution of APEX2 for electron microscopy and proximity labeling. JOURNAL Nat Methods. 2014 Nov 24. doi: 10.1038/nmeth.3179. PUBMED 25419960 REFERENCE 2 (bases 1 to 8042) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.biofeng.com FEATURES Location/Qualifiers source 1..8042 /organism="synthetic DNA construct" /mol_type="other DNA" enhancer 167..546 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 547..750 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" primer_bind 701..721 /label=CMV-F /note="Human CMV immediate early promoter, forward primer" primer_bind 795..814 /label=T7 /note="T7 promoter, forward primer" promoter 795..813 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" regulatory 849..858 /regulatory_class="other" /note="vertebrate consensus sequence for strong initiation of translation (Kozak, 1987)" CDS 2022..2738 /codon_start=1 /product="the original enhanced GFP (Yang et al., 1996)" /label=EGFP /note="mammalian codon-optimized" /translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK ANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL EFVTAAGITLGMDELYK" primer_bind complement(2067..2088) /label=EGFP-N /note="EGFP, reverse primer" primer_bind complement(2328..2347) /label=EXFP-R /note="For distinguishing EGFP variants, reverse primer" primer_bind 2675..2696 /label=EGFP-C /note="EGFP, forward primer" CDS 2778..3524 /codon_start=1 /product="soybean ascorbate peroxidase, engineered to serve as a monomeric tag for electron microscopy and live-cell proteomics (Lam et al., 2015)" /label=APEX2 /note="more active than the original APEX due to the A134P mutation" /translation="GKSYPTVSADYQDAVEKAKKKLRGFIAEKRCAPLMLRLAFHSAGT FDKGTKTGGPFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAV EVTGGPKVPFHPGREDKPEPPPEGRLPDPTKGSDHLRDVFGKAMGLTDQDIVALSGGHT IGAAHKERSGFEGPWTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDK YAADEDAFFADYAEAHQKLSELGFADA" primer_bind complement(3565..3582) /label=BGH-rev /note="Bovine growth hormone terminator, reverse primer. Also called BGH reverse" polyA_signal 3571..3795 /label=bGH poly(A) signal /note="bovine growth hormone polyadenylation signal" rep_origin 3841..4269 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(3928..3947) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 4138..4159 /label=F1ori-F /note="F1 origin, forward primer" primer_bind complement(4278..4298) /label=pBABE 3' /note="SV40 enhancer, reverse primer for pBABE vectors" promoter 4283..4612 /label=SV40 promoter /note="SV40 enhancer and early promoter" rep_origin 4463..4598 /label=SV40 ori /note="SV40 origin of replication" primer_bind 4525..4544 /label=SV40pro-F /note="SV40 promoter/origin, forward primer" CDS 4679..5473 /codon_start=1 /gene="aph(3')-II (or nptII)" /product="aminoglycoside phosphotransferase from Tn5" /label=NeoR/KanR /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin(R))" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" primer_bind complement(4733..4752) /label=Neo-R /note="Neomycin resistance gene, reverse primer" primer_bind 5343..5362 /label=Neo-F /note="Neomycin resistance gene, forward primer" polyA_signal 5647..5768 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(5684..5703) /label=SV40pA-R /note="SV40 polyA, reverse primer" primer_bind 5738..5757 /label=EBV-rev /note="SV40 polyA terminator, reverse primer" primer_bind complement(5817..5833) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(5817..5833) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(5830..5852) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 5841..5857 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(5865..5895) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 5910..5931 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(6048..6065) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(6219..6807) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(6299..6318) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(6978..7838) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 7601..7620 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(7839..7943) /gene="bla" /label=AmpR promoter primer_bind complement(8018..8037) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" ORIGIN 1 ttaagccagt atctgctccc tgcttgtgtg ttggaggtcg ctgagtagtg cgcgagcaaa 61 atttaagcta caacaaggca aggcttgacc gacaattgca tgaagaatct gcttagggtt 121 aggcgttttg cgctgcttcg cgatgtacgg gccagatata cgcgttgaca ttgattattg 181 actagttatt aatagtaatc aattacgggg tcattagttc atagcccata tatggagttc 241 cgcgttacat aacttacggt aaatggcccg cctggctgac cgcccaacga cccccgccca 301 ttgacgtcaa taatgacgta tgttcccata gtaacgccaa tagggacttt ccattgacgt 361 caatgggtgg agtatttacg gtaaactgcc cacttggcag tacatcaagt gtatcatatg 421 ccaagtacgc cccctattga cgtcaatgac ggtaaatggc ccgcctggca ttatgcccag 481 tacatgacct tatgggactt tcctacttgg cagtacatct acgtattagt catcgctatt 541 accatggtga tgcggttttg gcagtacatc aatgggcgtg gatagcggtt tgactcacgg 601 ggatttccaa gtctccaccc cattgacgtc aatgggagtt tgttttggca ccaaaatcaa 661 cgggactttc caaaatgtcg taacaactcc gccccattga cgcaaatggg cggtaggcgt 721 gtacggtggg aggtctatat aagcagagct ctctggctaa ctagagaacc cactgcttac 781 tggcttatcg aaattaatac gactcactat agggagaccc aagctggcta gcgtttaaac 841 ttaagcttgc caccatgggt gactggagtg ccttggggaa attactggac aaggtccaag 901 cctactccac cgctggaggg aaggtgtggc tgtcagtgct cttcatattc agaatcctgc 961 tcctggggac agctgttgag tcagcttggg gtgatgaaca gtctgccttt cgctgtaaca 1021 ctcaacaacc tggctgcgaa aacgtctgct atgacaagtc cttccccatc tctcacgtgc 1081 gcttctgggt ccttcagatc atattcgtgt ctgtgcccac actcctgtac ttggcccatg 1141 tgttctatgt gatgaggaag gaagagaagc taaacaagaa agaagaggag ctcaaagtgg 1201 cccagactga cggggtcaac gtggagatgc acctgaagca gattgaaatc aagaagttca 1261 agtacgggat tgaagagcac ggcaaggtga aaatgagggg cggcttgctg agaacctaca 1321 tcatcagcat cctcttcaag tctgtcttcg aggtggcctt cctgctcatc cagtggtaca 1381 tctatgggtt cagcttgagc gcggtctaca cctgcaagag agatccctgc ccccaccagg 1441 tagactgctt cctctcacgt cccacggaga aaaccatctt catcatcttc atgctggtgg 1501 tgtccttggt gtctctcgct ttgaacatca ttgagctctt ctacgtcttc ttcaagggcg 1561 ttaaggatcg cgtgaaggga agaagcgatc cttaccacgc caccactggc ccactgagcc 1621 catcaaaaga ctgcggatct ccaaaatacg cctacttcaa tggctgctcc tcaccaacgg 1681 ctccactctc gcctatgtct cctcctgggt acaagctggt tactggtgac agaaacaatt 1741 cctcgtgccg caattacaac aagcaagcta gcgagcaaaa ctgggcgaac tacagcgcag 1801 agcaaaatcg catggggcag gccggaagca ccatctccaa ctcgcacgcc cagccgttcg 1861 atttccccga cgacaaccag aatgccaaaa aagttgctgc tggacatgaa ctccagccat 1921 tagccatcgt ggaccaacga ccttccagca gagccagcag ccgcgccagc agcaggcctc 1981 ggcctgatga cctggagatt ggatccgggg gtggtgggtc tatggtgagc aagggcgagg 2041 agctgttcac cggggtggtg cccatcctgg tcgagctgga cggcgacgta aacggccaca 2101 agttcagcgt gtccggcgag ggcgagggcg atgccaccta cggcaagctg accctgaagt 2161 tcatctgcac caccggcaag ctgcccgtgc cctggcccac cctcgtgacc accctgacct 2221 acggcgtgca gtgcttcagc cgctaccccg accacatgaa gcagcacgac ttcttcaagt 2281 ccgccatgcc cgaaggctac gtccaggagc gcaccatctt cttcaaggac gacggcaact 2341 acaagacccg cgccgaggtg aagttcgagg gcgacaccct ggtgaaccgc atcgagctga 2401 agggcatcga cttcaaggag gacggcaaca tcctggggca caagctggag tacaactaca 2461 acagccacaa cgtctatatc atggccgaca agcagaagaa cggcatcaag gccaacttca 2521 agatccgcca caacatcgag gacggcagcg tgcagctcgc cgaccactac cagcagaaca 2581 cccccatcgg cgacggcccc gtgctgctgc ccgacaacca ctacctgagc acccagtccg 2641 ccctgagcaa agaccccaac gagaagcgcg atcacatggt cctgctggag ttcgtgaccg 2701 ccgccgggat cactctcggc atggacgagc tgtacaaggg gcgcgccaag ggctcgggct 2761 cgacctcggg ctcgggcgga aagtcttacc caactgtgag tgctgattac caggacgccg 2821 ttgagaaggc gaagaagaag ctcagaggct tcatcgctga gaagagatgc gctcctctaa 2881 tgctccgttt ggcattccac tctgctggaa cctttgacaa gggcacgaag accggtggac 2941 ccttcggaac catcaagcac cctgccgaac tggctcacag cgctaacaac ggtcttgaca 3001 tcgctgttag gcttttggag ccactcaagg cggagttccc tattttgagc tacgccgatt 3061 tctaccagtt ggctggcgtt gttgccgttg aggtcacggg tggacctaag gttccattcc 3121 accctggaag agaggacaag cctgagccac caccagaggg tcgcttgccc gatcccacta 3181 agggttctga ccatttgaga gatgtgtttg gcaaagctat ggggcttact gaccaagata 3241 tcgttgctct atctgggggt cacactattg gagctgcaca caaggagcgt tctggatttg 3301 agggtccctg gacctctaat cctcttattt tcgacaactc atacttcacg gagttgttga 3361 gtggtgagaa ggaaggtctc cttcagctac cttctgacaa ggctcttttg tctgaccctg 3421 tattccgccc tctcgttgac aaatatgcag cggacgaaga tgccttcttt gctgattacg 3481 ctgaggctca ccaaaagctt tccgagcttg ggtttgctga tgcctaactc gagtctagag 3541 ggcccgttta aacccgctga tcagcctcga ctgtgccttc tagttgccag ccatctgttg 3601 tttgcccctc ccccgtgcct tccttgaccc tggaaggtgc cactcccact gtcctttcct 3661 aataaaatga ggaaattgca tcgcattgtc tgagtaggtg tcattctatt ctggggggtg 3721 gggtggggca ggacagcaag ggggaggatt gggaagacaa tagcaggcat gctggggatg 3781 cggtgggctc tatggcttct gaggcggaaa gaaccagctg gggctctagg gggtatcccc 3841 acgcgccctg tagcggcgca ttaagcgcgg cgggtgtggt ggttacgcgc agcgtgaccg 3901 ctacacttgc cagcgcccta gcgcccgctc ctttcgcttt cttcccttcc tttctcgcca 3961 cgttcgccgg ctttccccgt caagctctaa atcgggggct ccctttaggg ttccgattta 4021 gtgctttacg gcacctcgac cccaaaaaac ttgattaggg tgatggttca cgtagtgggc 4081 catcgccctg atagacggtt tttcgccctt tgacgttgga gtccacgttc tttaatagtg 4141 gactcttgtt ccaaactgga acaacactca accctatctc ggtctattct tttgatttat 4201 aagggatttt gccgatttcg gcctattggt taaaaaatga gctgatttaa caaaaattta 4261 acgcgaatta attctgtgga atgtgtgtca gttagggtgt ggaaagtccc caggctcccc 4321 agcaggcaga agtatgcaaa gcatgcatct caattagtca gcaaccaggt gtggaaagtc 4381 cccaggctcc ccagcaggca gaagtatgca aagcatgcat ctcaattagt cagcaaccat 4441 agtcccgccc ctaactccgc ccatcccgcc cctaactccg cccagttccg cccattctcc 4501 gccccatggc tgactaattt tttttattta tgcagaggcc gaggccgcct ctgcctctga 4561 gctattccag aagtagtgag gaggcttttt tggaggccta ggcttttgca aaaagctccc 4621 gggagcttgt atatccattt tcggatctga tcaagagaca ggatgaggat cgtttcgcat 4681 gattgaacaa gatggattgc acgcaggttc tccggccgct tgggtggaga ggctattcgg 4741 ctatgactgg gcacaacaga caatcggctg ctctgatgcc gccgtgttcc ggctgtcagc 4801 gcaggggcgc ccggttcttt ttgtcaagac cgacctgtcc ggtgccctga atgaactgca 4861 ggacgaggca gcgcggctat cgtggctggc cacgacgggc gttccttgcg cagctgtgct 4921 cgacgttgtc actgaagcgg gaagggactg gctgctattg ggcgaagtgc cggggcagga 4981 tctcctgtca tctcaccttg ctcctgccga gaaagtatcc atcatggctg atgcaatgcg 5041 gcggctgcat acgcttgatc cggctacctg cccattcgac caccaagcga aacatcgcat 5101 cgagcgagca cgtactcgga tggaagccgg tcttgtcgat caggatgatc tggacgaaga 5161 gcatcagggg ctcgcgccag ccgaactgtt cgccaggctc aaggcgcgca tgcccgacgg 5221 cgaggatctc gtcgtgaccc atggcgatgc ctgcttgccg aatatcatgg tggaaaatgg 5281 ccgcttttct ggattcatcg actgtggccg gctgggtgtg gcggaccgct atcaggacat 5341 agcgttggct acccgtgata ttgctgaaga gcttggcggc gaatgggctg accgcttcct 5401 cgtgctttac ggtatcgccg ctcccgattc gcagcgcatc gccttctatc gccttcttga 5461 cgagttcttc tgagcgggac tctggggttc gaaatgaccg accaagcgac gcccaacctg 5521 ccatcacgag atttcgattc caccgccgcc ttctatgaaa ggttgggctt cggaatcgtt 5581 ttccgggacg ccggctggat gatcctccag cgcggggatc tcatgctgga gttcttcgcc 5641 caccccaact tgtttattgc agcttataat ggttacaaat aaagcaatag catcacaaat 5701 ttcacaaata aagcattttt ttcactgcat tctagttgtg gtttgtccaa actcatcaat 5761 gtatcttatc atgtctgtat accgtcgacc tctagctaga gcttggcgta atcatggtca 5821 tagctgtttc ctgtgtgaaa ttgttatccg ctcacaattc cacacaacat acgagccgga 5881 agcataaagt gtaaagcctg gggtgcctaa tgagtgagct aactcacatt aattgcgttg 5941 cgctcactgc ccgctttcca gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc 6001 caacgcgcgg ggagaggcgg tttgcgtatt gggcgctctt ccgcttcctc gctcactgac 6061 tcgctgcgct cggtcgttcg gctgcggcga gcggtatcag ctcactcaaa ggcggtaata 6121 cggttatcca cagaatcagg ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa 6181 aaggccagga accgtaaaaa ggccgcgttg ctggcgtttt tccataggct ccgcccccct 6241 gacgagcatc acaaaaatcg acgctcaagt cagaggtggc gaaacccgac aggactataa 6301 agataccagg cgtttccccc tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg 6361 cttaccggat acctgtccgc ctttctccct tcgggaagcg tggcgctttc tcatagctca 6421 cgctgtaggt atctcagttc ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa 6481 ccccccgttc agcccgaccg ctgcgcctta tccggtaact atcgtcttga gtccaacccg 6541 gtaagacacg acttatcgcc actggcagca gccactggta acaggattag cagagcgagg 6601 tatgtaggcg gtgctacaga gttcttgaag tggtggccta actacggcta cactagaaga 6661 acagtatttg gtatctgcgc tctgctgaag ccagttacct tcggaaaaag agttggtagc 6721 tcttgatccg gcaaacaaac caccgctggt agcggtggtt tttttgtttg caagcagcag 6781 attacgcgca gaaaaaaagg atctcaagaa gatcctttga tcttttctac ggggtctgac 6841 gctcagtgga acgaaaactc acgttaaggg attttggtca tgagattatc aaaaaggatc 6901 ttcacctaga tccttttaaa ttaaaaatga agttttaaat caatctaaag tatatatgag 6961 taaacttggt ctgacagtta ccaatgctta atcagtgagg cacctatctc agcgatctgt 7021 ctatttcgtt catccatagt tgcctgactc cccgtcgtgt agataactac gatacgggag 7081 ggcttaccat ctggccccag tgctgcaatg ataccgcgag acccacgctc accggctcca 7141 gatttatcag caataaacca gccagccgga agggccgagc gcagaagtgg tcctgcaact 7201 ttatccgcct ccatccagtc tattaattgt tgccgggaag ctagagtaag tagttcgcca 7261 gttaatagtt tgcgcaacgt tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg 7321 tttggtatgg cttcattcag ctccggttcc caacgatcaa ggcgagttac atgatccccc 7381 atgttgtgca aaaaagcggt tagctccttc ggtcctccga tcgttgtcag aagtaagttg 7441 gccgcagtgt tatcactcat ggttatggca gcactgcata attctcttac tgtcatgcca 7501 tccgtaagat gcttttctgt gactggtgag tactcaacca agtcattctg agaatagtgt 7561 atgcggcgac cgagttgctc ttgcccggcg tcaatacggg ataataccgc gccacatagc 7621 agaactttaa aagtgctcat cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc 7681 ttaccgctgt tgagatccag ttcgatgtaa cccactcgtg cacccaactg atcttcagca 7741 tcttttactt tcaccagcgt ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa 7801 aagggaataa gggcgacacg gaaatgttga atactcatac tcttcctttt tcaatattat 7861 tgaagcattt atcagggtta ttgtctcatg agcggataca tatttgaatg tatttagaaa 7921 aataaacaaa taggggttcc gcgcacattt ccccgaaaag tgccacctga cgtcgacgga 7981 tcgggagatc tcccgatccc ctatggtgca ctctcagtac aatctgctct gatgccgcat 8041 ag //
载体图谱质粒图谱pdf版和相关资料下载
载体质粒应用举例
- 上一篇:pNLS-iRFP713
- 下一篇:BC-GPR56